Mutation P84243 at position 12: T → C (T12C)

Overview
Predicted structure (AF):
AF-P84243-F1-model_v4
Uniprot entry:
P84243
Gene:
P84243
Protein length:
136 residues
Mutation:
T → C
Mutation position:
12
D2Deep Prediction:
0.003
Overall confidence:
0.848
Pred. interpretation:
Benign based on D2Deep prediction
 
Benign
Pathogenic
Scores that are greater than or equal to 0.5 are considered "Pathogenic", while scores that are less than 0.5 are considered "Benign".
Sequence difference
7 8 9 10 11 12 13 14 15 16 17
Original T A R K S T G G K A P
Target T A R K S C G G K A P
Predicted original structure

Differences at amino acid level
Feature Original «T» Target «C»
Name Threonine (Thr) Cysteine (Cys)
Molecular Formula C4H9NO3 C3H7NO2S
Residue Formula C4H7NO2 C3H5NOS
Molecular Weight 119.120 121.160 (+2.040)
Residue Weight 101.110 103.150 (+2.040)
Hydrophobicity index at pH 2 Neutral Hydrophobic
Hydrophobicity index at pH 7 Neutral Hydrophobic
Charge Neutral Neutral
Solutibility Undetermined Undetermined
Structure Image Original Structure Target Structure
Description Threonine (Thr) is within reactions in bacteria and metabolic rate in animals. However, the exact effect has not yet been determined. Cysteine (Cys) is able to form disulfide bridges between to peptide chains and also form loops within a singular chain.
Predicted structures comparison

About these 3D Structures: The 3D structure representations of both original and target sequences (trimmed to 400 residues, from 1 to 136) will be modeled using the ESM Metagenomic Atlas tools. ESM Metagenomic Atlas is a web-based tool for protein structure prediction that uses deep learning methods to predict protein folding and structure from protein sequences.

Below the plots, you will find additional details on how to interpret the biophysical results.


Differences at biophysical features

About these plots: These plots have been generated by using Bio2Byte predictors to plot both the original and target sequences.

The biophysical features are calculated when you click on the button below. Please be patient, the process may take several seconds. This page will be redirected when the results are obtained.
Predict biophysical features